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Repeat session starting in 80 minutes at 20:00 UTC

1pm West Coast
4pm East Coast

NCBI NIHR Research @NIH Arang Rhie Earth BioGenome Project 최 효성

📣📣📣Starting in 6 hours at 13:00 UTC

EASEL: software for eukaryotic structural and functional genome annotation

by Jill Wegrzyn (jillwegrzyn.bsky.social) Cynthia Webster Vidya Vuruputoor (vuruputoor.bsky.social)

Zoom and Discord links at BGA23.org/sessions

Six days to #BG23 ! 🧬

We'll explore opportunities for boosting utilisation of #genomic data for #biodiversity characterisation and conservation, focusing on technological and logistical opportunities.

Register: events.venue-av.com/e/BG23_registr…

European Research Executive Agency European Reference Genome Atlas @BIOSCANEurope

The last of 3 (yes three!) Nextflow for Genomics BGA23.org/sessions is starting tomorrow (26 Sep) at 16:00 UTC

Come along to learn from Solenne Correard who has done a great job of making nextflow accessible and relevant

Zoom and Discord links at BGA23.org/sessions

📣📣📣 Starting in exactly 12 hours!

ENA data retrieval and EMBL-EBI's Biodiversity Portals

by Alexey Sokolov and Joana Pauperio EMBL-EBI

Zoom and Discord links at BGA23.org/sessions

Come along to find out the incredible wealth of resources that EBI makes available!

How can #reference #genomes empower conservation?

Barbara Keller brings the example of Hottonia palustris, assessing the genetic #diversity & structure of remnant Swiss populations 🇨🇭 #ERGAPilot

Register for #BG23 !👉events.venue-av.com/e/BG23_registr…

Earth BioGenome Project Biodiversity Genomics

📣📣📣Starting in 4 hours at 12:00 UTC (today, 26 Sep)

Assess genome assemblies with Merqury

by Arang Rhie from NIH who wrote it!

Zoom and Discord links at BGA23.org/sessions

You'll need BGA23.org/gitpod as well for the practical examples.

See you in a bit :-)

📣📣📣 Starting in exactly 4 hours at 15:00 UTC

Querying genome metadata and sequencing projects using GoaT

by Cibele Sotero-Caio

Zoom and Discord links at BGA23.org/sessions

Everyone is welcome to join in Earth BioGenome Project
European Reference Genome Atlas Biodiversity Genomics Europe (BGE) African BioGenome Project

📣📣📣Repeat session starting in 3 hours at 12:00 UTC

If you missed the first one, definitely join this one as Katharina Hoff is an amazing presenter and had lots of fabulous tips for BRAKER3 and Gene prediction in general

Zoom and Discord links at BGA23.org/sessions

📣📣📣Starting in EXACTLY 12 hours!

ENA Standards and Submission

by Maira Ihsan, EMBL-EBI European Nucleotide Archive (ENA)

Zoom and Discord link at BGA23.org/sessions

Do join if you've ever wanted to submit sequences / data in bulk/programatically to the INSDC (eg ENA, NCBI, DDBJ)

Caught Dr. Toby Baril's exciting presentation on 𝗘𝗮𝗿𝗹 𝗚𝗿𝗲𝘆 (tinyurl.com/2hy84a5r) 🌟, a fully automated transposable elements (TE) annotation pipeline, at @BGAcademy23! 🚀 My first run was fun😊. Don't miss out on more informative sessions at BGA23.org/sessions.

📣📣📣 Starting in 1 hour!

Scalable telomere-to-telomere assembly with hifiasm

by Haoyu Cheng, first author of hifiasm with Heng Li

nature.com/articles/s4159…

Zoom and Discord link at BGA23.org/sessions

Please have Gitpod BGA23.org/gitpod

📣📣📣 STARTING IN 30 MIN!

Gfastar: a tool suite to assist genome assembly

by Giulio Formenti, Cassidy Johnson, Jack Medico The Rockefeller University

Zoom and Discord link at BGA23.org/sessions

Please get Gitpod! BGA23.org/gitpod

See you in a bit! :-)

📣📣📣 Starting in 30 minutes!

Gene prediction with BRAKER3 - BGA23.org/B3

with Katharina Hoff Katharina Hoff , who has been doing gene predictions since before I even knew what an intron was! :-)

Zoom Link at BGA23.org/sessions

📣
Starting in 1 hr 30 min at 17:00 UTC, Thu 21 Sep
📣

Assembling Genomes with the VGP-Galaxy Pipeline by Delphine Larivière , first author of biorxiv.org/content/10.110…

BGA23.org/vgpgalaxy Zoom link on page
Prerequisite - get a user login at usegalaxy.org first

Starting in 2.5 hours at 23:00 UTC!

🧬 Nextflow for Genomics 🧬

Solenne Correard has very kindly opened it to anyone interested

Zoom link at BGA23.org/nextflow-genom…

Please RT if you know anyone who might be interested

You need Gitpod for this session BGA23.org/gitpod

If you've ever wanted to assess Homology and Gene Set completeness,

use the comprehensive OMA database and OMArk tool

Zoom link and session details at BGA23.org/oma-omark

Please RT if you know anyone who might benefit from this. Thanks!

#Biodiversity #Genomics #Academy