Luke Zappia
@_lazappi_
Bioinformatics postdoc
(he/him)
Incase of the Tweet death of the universe find me here @[email protected]
ID:2601010981
http://lazappi.id.au 03-07-2014 04:14:26
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We're thrilled to share 'Spapros', our end-to-end probe set selection and design pipeline for designing targeted spatial transcriptomics experiments! biorxiv.org/content/10.110β¦ ,a collab of the labs of Fabian Theis,C. Samakovlis,Ali M. Erturk,Marie Piraud,Peter Horvath, details π§΅π 1/N
SuperMarioBio is back for #ScienceWeek ! This is the third year I've done this so it's now officially a tradition. This time I've tried something a bit closer to my day job at Peter Mac Research by looking at the tumour suppressor gene TP53.
Video youtu.be/2D6ByS7wejU or π§΅1/5
Ready, set, code! The Open Problems in Single-Cell Analysis competition at #NeurIPS2022 is open, featuring $25,000 in prizes & a new multimodal #singlecell timecourse deeply profiling hematopoiesis π₯³ ππ§ͺπ§«
Join us on Kaggle! kaggle.com/competitions/oβ¦
To learn more, read on π§΅π
Everything in this article is damning. Declining federal research funding. Lack of job security & flow on effects. Power imbalances. Bullying, sexism, racism, depression & burnout. Inevitable brain drain. #DiscoveriesNeedDollars #OzNotSoCleverCountry
theage.com.au/national/a-higβ¦
ICML-Compbio-Workshop workshop is in full swing! Checkout our contribution on 'Uncertainty Quantification for Atlas-Level Cell Type Transfer'. icml-compbio.github.io/2022/papers/WCβ¦
HCATonsilData installs SingleCellExperiment objects from our dataset in a modular fashion. Thanks to the work of Luke Zappia and Aaron Lun, it's very easy to convert it to an AnnData object using zellconverter.
Expanded and updated paper from Belinda Phipson
propeller: testing for differences in cell type proportions in single cell data biorxiv.org/content/10.110β¦
I'm looking for a postdoc to join my lab with a focus on developing methods for single cell & spatial data, coupled with exciting collaborative projects in this space. My goal is to foster a supportive & collaborative environment. Apply here -> wehi.wd3.myworkdayjobs.com/en-US/WEHI/jobβ¦