We work with zebrafish! Our first (method) paper on polymicrobial infections, real-time imaging and automated data analysis with this exciting model host. Now out on bioRxiv by Desiree Schmitz with Hongwei Bran Li menze_group Department of Quantitative Biomedicine biorxiv.org/content/10.110…

Happy to be part of the instructing team of the "Machine Learning in Archaeology: An introduction to concepts and practical applications" workshop! icarehb.com/icarhub/tifa/m… It is our pleasure to share machine learning techniques with archaeologists🤠

ISLES'22 challenge preprint is out! 🎉🎉 Check it out here👉 —> Link to preprint lnkd.in/eERDc-HY —> Link to challenge lnkd.in/er44ky2e —> Link to data lnkd.in/eSiRKESY —> Link to Git repo (try it out and let us know your comments) lnkd.in/e_wGTbhN

Happy to be co-organizing the ISLES 2024🆕challenge! Feels like tackling the ischemic stroke lesion segmentation challenge? Come join us at ISLES! 👉Check out our website to learn more about this edition: isles-24.grand-challenge.org

Very excited to share that our DELiVR method is now open access published @NatureMethods. We created a simple, brain-wide cell analysis deep learning tool, no coding needed! Fiji Plugin makes it accessible to all. nature.com/articles/s4159… by Doris Kaltenecker Rami @[email protected]

We invite submissions to the exciting SWITCH workshop on stroke imaging and treatment! New deadline extended to June 29th 2024 👉switchmiccai.github.io/switch/

🔬We are proud to introduce the SELMA challenge, one of the first and biggest challenges on self-supervised learning for 3D light-sheet microscopy image segmentation! Training data is released and accepting submissions as part of MICCAI 2024: selma3d.grand-challenge.org/selma3d/

Happy to be part of the team! Looking forward to the submissions 👏

Menze group went to Boston! On June 24th - June 28th, 2024 at MIT, we presented our proposed 3D Slicer extension during the 41st NA-MIC project week. Check out our project: "OMAS CT: Open Model for Anatomy Segmentation in Computer Tomography" 👉projectweek.na-mic.org/PW41_2024_MIT/…

🐮 Call for participants for TopCoW 2024 challenge! 📢 TopCoW is back for a second edition in 2024! Segment, classify, and detect the Circle of Willis (CoW) for both CTA and MRA at:  topcow24.grand-challenge.org Download our data now and submit your awesome algorithm in Sep-Oct 💪

📢Call for participants to the 2024 ISLES challenge! All training set has been released. We look forward to your submissions at isles-24.grand-challenge.org

Make sure to check out MouseMapper 🐭🗺️! A powerful AI tool for system-wide disease analysis: MouseMapper can visualize, analyze, and discover disease progressions and mechanisms at unprecedented resolution and scale! E.g. tracking nerves over cm in whole animal bodies 🔬🐁🌟😃