RS-FISH is out as open access article in Nature Methods
Great collaboration with Ella Bahry Laura Breimann Marwan Zouinkhi Kyle Harrington Timothée Lionnet from HHMI | Janelia MDC-BIMSB Max Delbrück Center NYU Langone Health

github.com/PreibischLab/R…
github.com/PreibischLab/R…
nature.com/articles/s4159…

Out today! Radial Symmetry-FISH (RS-FISH) -- an accurate, fast, and user-friendly software for spot detection in 2D and 3D images. Bring on your smFISH, spatial transcriptomics, or spatial genomics applications! Kyle Harrington Timothée Lionnet Stephan Preibisch

We are excited to share with you our updated version of RS-FISH, an easy to use tool to detect diffraction-limited spots in all kinds of FISH images that works on small up to very large images [1/5].

biorxiv.org/content/10.110…

I’m very excited to share this story that is part of my PhD work where we wanted to understand the regulation of #condensin binding dynamics and the proteins involved in #Celegans biorxiv.org/content/10.110…

We are excited to share with you RS-FISH: Precise, interactive and scalable smFISH spot detection in Fiji using 3D Radial Symmetry:

biorxiv.org/content/10.110…

(1/8)

Nikolaus Rajewsky As a PhD candidate, I would also love to see more female group leaders in MDC-BIMSB and Max Delbrück Center.
That would show me that many 'like me' can make it. *Maybe* many are like me and this would be a way of increasing the rate of women applicants everywhere? EMBO

❤️

check out the beta release of maui, our tool for multi-omics data integration using variational autoencoders #DeepLearning #Cancer #genomics github.com/bimsbbioinfo/m…. If you encounter problems please open an issue on GitHub. biorxiv.org/content/early/…

netSmooth - network-smoothing based imputation for single cell RNA-seq - bit.ly/2uFHByu

Love the BigStitcher on Fiji! Makes 3D reconstruction, stitching, alignment, deconvolution, and viewing easy.
Stephan Preibisch David Hörl Fantastic (and impressive) software/tool and paper!! twitter.com/preibischs/sta…

Announcing 10th Anniversary Light Sheet Fluorescence Microscopy Conference #LSFM18 MPI-CBG Dresden in Dresden August 12 -15th 2018. lightsheet.mpi-cbg.de

Please retweet.

Great talk by milkyklim @NEUBIAS conference with his radial symmetry @Fiji plugin.

We just got the Nvidida GPU Grant Awarded Ella Bahry milkyklim! One Quadro P6000 for developing deep learning applications, pretty cool! Thanks a lot NVIDIA!

so far, paper of the year!!!! @kerfufflep Altuna Akalin f1000research.com/articles/7-8/v1

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