In episode 16 of 🚀Phase Space Invaders🎙️, I'm joined by Janusz Bujnicki Janusz Bujnicki! Listen on Spotify or other platforms: open.spotify.com/episode/50JVjP… Alluding to the recent #CASP #RNA competitions, we discuss how #bioinformatics and #biophysics can work together to yield a

Interested in what OpenFF is doing, but hard to see the big picture from our individual publications? We just published a review/perspective in J Phys Chem B that summarizes/highlights recent work! pubs.acs.org/doi/10.1021/ac…

Just published in Angewandte Chemie our latest work! We uncovered the importance of monovalent metal ions in the catalysis of Pre-Ribosomal RNA-Processing Machinery. Congrats to J Borišek Kemijski inštitut and J Aupič CNR Consiglio Nazionale delle Ricerche for their excellent contributions! 🔬📚onlinelibrary.wiley.com/doi/10.1002/an…

At the end of season 2 of Phase Space Invaders, I took a while to reflect on some common threads in the recent conversations - our responsibilities as scientists, contributions to (bio-)medicine, sharing technical knowledge, and setting meaningful goals in life:

today is the 3-year anniversary of my research group! 🥳🥳 big thanks to UniSysCat - Cluster of Excellence TU Berlin for supporting my ideas! We went from 1 member (me) to 5 members (me, 1 postoc, 3 PhD students). #newPI (I think I finally got the gist of this job😂)

I have been working like absolute crazy over the past two months for this - #MolecularNodes 4.2 is now released for #b3d 4.2 A huge number of new features - which I will cover some here. - Selections using MDAnalysis selection language are updated live.

After years of crying to a bunch of StackOverflow tabs, we Unix users can finally feel vindicated 😂

Thanks for submitting your exciting papers to JCTC! While the journal has a broad scope described at pubs.acs.org/page/jctcce/ab… , as Associate Editor I especially look forward to papers with new theory/methods involving MD/MC, ML/AI, stat mech and sampling

Romania's disastrous way to fund excellence in research. linkedin.com/posts/vlad-coj…

Amortized template-matching of molecular conformations from cryo-electron microscopy images using simulation-based inference From Pilar Cossio and Roberto Covino

Signed by over 120 experts, our letter highlighting the urgent need for a collaborative effort to establish a #FAIR database for #MolecularDynamics simulation data, is now on Arxiv. 📎 Read it here: bit.ly/3WjcC7x 📝Support our statement: bit.ly/3zVS3qm #MDDB

Only a few days left, folks. Apply to join my team in Biochemistry at Oxford. It’s fun place to be. Awesome teammates, great collaborators and a world class institution 🎓

OMG 😱 finally a protein language model that captures coevolution at protein-protein interface(s)!

I'm excited to share a perspective I wrote in Science Advances on an exciting new paper from Francesco Pesce Kresten Lindorff-Larsen and TanjaMittag on computationally designing IDR sequences with desired properties. Paper: science.org/doi/10.1126/sc… Perspective: science.org/doi/10.1126/sc…

Great opportunity to work with my colleague Johan Åqvist at Uppsala University, using simulation to explore enzyme evolution and adaptation to extreme environments. For more details and an application list, see: uu.varbi.com/en/what:job/jo…

Hiring a Postdoc! Join our Structural Biology Lab at the University of Gdansk for a 4-year research project on the ubiquitin-proteasome system. Deadline: Oct 15, 2024. #Postdoc #HiringNow #StructuralBiology #AcademicTwitter #ProteinResearch

My guest in today's episode 18 of the Phase Space Invaders #podcast is Erik Lindahl Erik Lindahl - eriklindahl.bsky.social! Listen on Spotify or any other podcast platform. In the conversation, Erik highlights the need to think deeply about the questions in #biology that we're after, and to find the