Xueyi Dong 董雪漪
@dongxueyi
Bioinformatics postdoc @WEHI_research. @ZJU_china alumni. Bioconductor Community Advisory Board. Expert in RNA-seq. Cat person🐱
ID: 940876570461384704
13-12-2017 09:30:29
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Very happy to see this is finally published in Nucleic Acids Res. standR - providing standard and easy workflow to analyse your NanoString GeoMx spatial transcriptomics datasets. academic.oup.com/nar/advance-ar…
Excited to share the first paper from the Tian Lab! With Xiaodong(Ethan) Liu we together established reference and standard to compared multiple sequencing-based spatial transcriptomic (sST) methods. Here is the preprint and some highlights (1/n) biorxiv.org/content/10.110…
Exciting #Postdoc/#RA opportunity to advance #Spatial and #SingleCell Computational #Immunogenomics applied to cancer! South Australian immunoGENomics Cancer Institute Deadline: 14th Jan careers.adelaide.edu.au/cw/en/job/5131… Plz spread the word 🙏 #postdoc #postdocjobs #postdoctoral #postdocposition #researchjobs #sciencejobs
Amazing results from Sergey Koren. Near perfect assembly of human, ont only. "We found the accuracy of Duplex data to be similar to HiFi sequencing, but with read lengths tens of kb longer, .... assemblies have a base accuracy exceeding 99.999% (Q50) and near-perfect continuity"
Interested in 10x Genomics Visium technology and how different tissue handling protocols compare? Check out the SpatialBench project👇 A huge thank you to Mei Du Changqing Charity Law Daniela Zalcenstein Diana Hansen Rory Bowden WEHI (Walter and Eliza Hall Institute) & their teams for data + analysis
The choice of whether to use Seurat or Scanpy for single-cell RNA-seq analysis typically comes down to a preference of R vs. Python. But do they produce the same results? In biorxiv.org/content/10.110… w/ Joseph Rich et al. we take a close look. The results are 👀 1/🧵
🧹🤩 #tidyomics made it to Nature Methods! "The tidyomics ecosystem: Enhancing omic data analyses", 👏🏽, William Hutchison, Timothée Keyes, PhD, and Team! 32 researchers | 26 institutes | 10 countries | 4 continents A #crowd/#community-research success nature.com/articles/s4159… CZI Science
📢🎉 Our lab is recruiting x3! #Postdoc & #PhD Join from🌏 inc AU, EU, US! Great scientific environment and a very attractive salary. 1. #AI for #singlecell biology 2. #Multiomics, immuno diagnosis (sc+spatial+metab.) 3. #tidyomics + #HPC Plz share! 🙏mangiolalaboratory.github.io/Mangiola-Lab-O…