'Clonal expansion in normal tissues'
onlinelibrary.wiley.com/doi/10.1111/ca…

Cool paper alert. Putting worms on ice or giving them lithium retains memory.
Humans? Study hard for an exam. Then quickly put ice on your head or eat lithium (don't), you will remember and pass.😀

Excited to share our new paper published online at @nature! Congrats to the team, led by super talented students Jordan Kesner and Ziheng Chen nature.com/articles/s4158…

I was asked this question very often: “Tommy, what’s the p-value cutoff should I use to determine the differentially expressed genes; what log2 Fold change cutoff should I use too?” New blog post: Bioinformatics is not (just) statistics divingintogeneticsandgenomics.com/post/bioinform…

Reliable, fully local RAG agents with Llama3

With the release of Llama3, there's high interest in agents that run reliably & locally (e.g., on your laptop).

Here, we show to how build reliable local agents using LangGraph and Llama3-8b from scratch.

As a example, we combine

ScreenAI is a Vision-Language Model (VLM) developed by Google AI that can comprehend both user interfaces (UIs) and infographics.

It's wild — capable of tasks like graphical question-answering, element annotation, summarization, navigation, and UI-specific QA.

Single-cell allele-specific expression analysis reveals dynamic and cell-type-specific regulatory effects | Nature Communications
nature.com/articles/s4146…

As it nears the end of the semester, it is my turn to write the #Math371 blog post. I wrote about ways that teachers can use AI to make things easier. mathtechsdsu.blogspot.com/2024/04/what-i…
#iteachmath #mtbos

theguardian.com/commentisfree/…

Another large & useful resource from the Ma'ayan lab!
The reanalyzed all human and mouse RNA-Seq data in GEO and identified differentially expressed genes. You can search and discover something just based this!

RummaGEO: Automatic Mining of Human and Mouse Gene Sets from GEO biorxiv.org/content/10.110…

Three days! Submit by Friday! #ismb2024 #Bioinformatics

🚨Upon his return from Gaza, the president of the World Surgical Foundation says 'Genocide was the overwhelming impression that I got'

He adds 'The world's best marksmen are not gonna shoot a kid in the head twice & in the abdomen'

Very harrowing details

How to pick a problem. Today in Cell. 1/53
cell.com/cell/fulltext/…

Free workshop Tuesday 6pm (In-person or via Zoom)
A gentle introduction to R programming
This is a hands-on workshop for anyone interested in the R programming language. Faculty, staff, graduate, and undergraduate students are all welcome. Intended for beginners who have no or

iDEP users, Last chance to send an letter of support for iDEP. It can be a few words in an email. [email protected] Thanks.