Harika Urel
@harika_urel
PhD student @MunichDS, @Helmholtz_AI, @PioneerCampus & @TU_Muenchen, developing deep learning models for microbial viability using nanopore signals #OneHealth
ID: 1491725949079109632
10-02-2022 10:49:33
119 Tweet
137 Followers
314 Following
.Lara Urban & team demonstrate the potential of analysing raw nanopore signal data to infer the viability of microorganisms. They discuss its ability to overcome high false negative rates of culture-based methods & potential applications in environmental & clinical settings.
On a quick note from maternity leave: My group's publication on using real-time Oxford Nanopore genomics to enhance the accuracy of antibiotic resistance profiling in complex infections led by Ela Sauerborn TU München Helmholtz Munich | @HelmholtzMunich is now published: nature.com/articles/s4146…
Excited that our paper is finally out! Many thanks to my PI Lara Urban for guiding and pushing this project to the finish line and to everyone else involved especially my supervisors Ebenezer Foster-Nyarko and Nick Goldman!
Great talk by Lara Urban from Helmholtz AI & TU München on using #OneHealth real-time genomics approaches to monitor antimicrobial resistance #EMBL50
Check out our blog post about our recent publication looking at the benefits of Nanopore sequencing for clinical microbiology: communities.springernature.com/posts/discover… Lara Urban :)
More news Helmholtz Munich | @HelmholtzMunich: Ela Sauerborn's pub was highlighted as one of the best recent Nature Communications Microbio/Infectious disease papers: nature.com/collections/je…, Ela was invited by Oxford Nanopore to present it at #NCM24 #NanoporeConf & here our blog post: communities.springernature.com/posts/discover…
I am super excited that our paper is now also featured in the Nature Communications editors highlights for Microbio & ID papers! nature.com/collections/je…
.Lara Urban & team demonstrate the ability of real-time nanopore sequencing in identifying the antibiotic resistance of pathogens hidden to standard methods — showcasing its potential to characterise drug resistant infections in hospital settings. bit.ly/4cXRZEE
Advancing antibiotic resistance detection with real-time genomics "The focus of our study was a clinical case involving a severe infection caused by multi-drug resistant Klebsiella..." Lara Urban Ela Sauerborn #bacteria #AntibioticResistance #AMR communities.springernature.com/posts/discover…
Can zoo visitors identify inbreeding of endangered species (pink pigeons) by playing a sonification game? w/ Samuel Speak, Cock van Oosterhout, Hernán Morales & Lara Urban Biological Sciences | University of Edinburgh The University of Edinburgh UEA College of Science and Engineering, Edinburgh Uni UCPH Healthscience Helmholtz AI doi.org/10.1002/zoo.21… 1/5
Identifying harmful mutations 🧬 and best mating pairs could be key for captive populations 🐦 Eddie Martin captured this genomic info into audio tracks to communicate difficult conceptual knowledge to the public 🔥 Check out our paper, and the thread below with the 🎶 clips
Find out how the genetic basis of the kākāpō structural color polymorphism suggests balancing selection by an extinct apex predator – such a great collaboration w Hernán Morales Dr Andrew Digby Deidre Vercoe GenomicsAotearoa Anna Santure Joseph & many more: journals.plos.org/plosbiology/ar…
Amazing week at the #EWDA2024 congress, where I had the opportunity to present our work using Oxford Nanopore for real-time AIV surveillance. Huge thanks to the organizers for such a great event! EWDA Student chapter Lara Urban
While I travel less due to now having my baby at home, I am super proud to see my group presenting our research out there – Albert Perlas 🍉 EWDA Student chapter on AIV monitoring, Ela Sauerborn ETH Zürich Ascona workshop & #NCM Oxford Nanopore on AMR monitoring, Harika Urel & Samir gcb2024, ...
