Shalin Mehta(@mattersOfLight) 's Twitter Profileg
Shalin Mehta

@mattersOfLight

intrigued by light, logic and life. Platform Leader, Computational Microscopy at CZ Biohub (@czbiohub). Views my own.

ID:2480597803

linkhttps://www.czbiohub.org/comp-micro/ calendar_today06-05-2014 22:33:04

767 Tweets

1,2K Followers

857 Following

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Loïc A. Royer 💻🔬⚗️ 🇺🇦(@loicaroyer) 's Twitter Profile Photo

The latest version of now has support for StarDist from Martin Weigert and Uwe Schmidt !

napari-hub.org/plugins/napari…

In the video below, I ask Omega to segment all the nuclei, count them, write a CSV file with all the nuclei coordinates and areas, and open it! 🤯

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Shana Kelley(@ShanaOKelley) 's Twitter Profile Photo

Interested in becoming a Group Leader at Chan Zuckerberg Biohub Chicago? These are fully-funded positions for researchers interested in developing instrumented tissues. boards.greenhouse.io/czbiohubchicag…

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Assaf Zaritsky(@AssafZaritsky) 's Twitter Profile Photo

Meghan Driscoll and I are organizing a 'beyond pretty pictures' American Society for Cell Biology subgroup!

If you extract cell biological insight by analyzing microscopy images please consider submitting an abstract by August 1 🔥

ascb.org/cellbio2023/?_…

Please RT

@MegDrisc and I are organizing a 'beyond pretty pictures' #cellbio2023 @ASCBiology subgroup! If you extract cell biological insight by analyzing microscopy images please consider submitting an abstract by August 1 🔥 ascb.org/cellbio2023/?_… Please RT
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Shalin Mehta(@mattersOfLight) 's Twitter Profile Photo

It was fun to share our work on image informatics at Boston University Bioinformatics Student Organized Symposium and learn about recent progress in parsing biological systems from omics, histopathology, and ecological datasets.

It was fun to share our work on image informatics at Boston University Bioinformatics Student Organized Symposium and learn about recent progress in parsing biological systems from omics, histopathology, and ecological datasets.
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Chan Zuckerberg Biohub Network(@czbiohub) 's Twitter Profile Photo

An tool that opens the door to high quality serosurveillance studies in low-resource settings, co-led by Shalin Mehta/ @MattersofLight, John Pak, Bryan Greenhouse, PrakashLab & many more from .

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Shalin Mehta(@mattersOfLight) 's Twitter Profile Photo

Thank you Alexa Mattheyses
Paul Maddox
Kner Lab
Gary Laevsky @[email protected] for having me at AQLM.

SciTweeps, if you want to sharpen your knowledge of microscopy, apply for 2024 installment next January!

Follow AQLM to see how the course takes students from concepts to the SOTA.

Thank you @mattheyseslab @paul_s_maddox @KnerLab @glaevsky for having me at @AQLMMBL. SciTweeps, if you want to sharpen your knowledge of microscopy, apply for 2024 installment next January! Follow @AQLMMBL to see how the course takes students from concepts to the SOTA.
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Shalin Mehta(@mattersOfLight) 's Twitter Profile Photo

I am sharing my team's most active open-source projects in computational imaging and deep learning for bioimaging. We welcome users and contributors!

This nice poster is courtesy of Eduardo 'Yoshi' Hirata and Ziwen Liu, presented at the recent Chan Zuckerberg Biohub Network confab.

I am sharing my team's most active open-source projects in computational imaging and deep learning for bioimaging. We welcome users and contributors! This nice poster is courtesy of @edyoshikun and @ZW_Liu, presented at the recent @czbiohub confab.
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Jan Funke(@janfunkey) 's Twitter Profile Photo

How can machine learning help you to analyze your microscopy images?

Find out at the 'Deep Learning for Microscopy Image Analysis' course at the Marine Biological Laboratory (MBL) in Woods Hole from Aug 21-Sep 5!

Applications are due 🚨 May 18 🚨

Read on for more! 👇

mbl.edu/education/adva…

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Massimo(@Rainmaker1973) 's Twitter Profile Photo

Happy 255th to Joseph Fourier, whose transform is used in

- quantum mechanics
- signal processing
- spectroscopy
- digital compression of images and data
- solving differential equations
- designing electrical circuits
- ...

and many more buff.ly/3LG3w0P…

Happy 255th #Birthday to Joseph Fourier, whose transform is used in - quantum mechanics - signal processing - spectroscopy - digital compression of images and data - solving differential equations - designing electrical circuits - ... and many more buff.ly/3LG3w0P…
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Loïc A. Royer 💻🔬⚗️ 🇺🇦(@loicaroyer) 's Twitter Profile Photo

We present : a timecourse atlas of zebrafish embryonic development, combining time-course data with live imaging. Explore our seq. and imaging datasets interactively at

biorxiv.org/content/10.110…

zebrahub.org
1/n

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Shalin Mehta(@mattersOfLight) 's Twitter Profile Photo

Impressed with GitHub Copilot - it offered a comment on why DataLoader and WeightedRandomSampler are used in this script. It is somehow parsing the structure of the code! 😎

Impressed with @GitHubCopilot - it offered a comment on why DataLoader and WeightedRandomSampler are used in this script. It is somehow parsing the structure of the code! 😎
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Adrian Jacobo(@Adrian_Jacobo) 's Twitter Profile Photo

We are organizing a Physics of Life Symposium! If you use or are interested in using the tools and concept of Physics to study Biology we'd love to see you there!

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Florian Jug(@florianjug) 's Twitter Profile Photo

Look at all these opportunities!!!
One of the great courses in the 2023 lineup: mbl.edu/education/adva…
This year was again epic… maybe you want to join us next year?!?

Look at all these opportunities!!! One of the great courses in the 2023 lineup: mbl.edu/education/adva… This year was again epic… maybe you want to join us next year?!?
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Shalin Mehta(@mattersOfLight) 's Twitter Profile Photo

Excited to be presenting at the computation & theory seminar HHMI | Janelia tomorrow morning. Looking forward to brainstorming science and exploring collaborations w/ Jan Funke and other Janelians.

Excited to be presenting at the computation & theory seminar @HHMIJanelia tomorrow morning. Looking forward to brainstorming science and exploring collaborations w/ @janfunkey and other Janelians.
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Jan Funke(@janfunkey) 's Twitter Profile Photo

This was DL@MBL 2022, the Deep Learning for Microscopy Image Analysis course at the Marine Biological Laboratory (MBL) in Woods Hole!

Thanks to Anacris (IG: anacrispascual) for the video!

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