The BMJ is looking for a freelance statistical reviewer, offering to pay £115/review.

Yes we can professionalise peer review and pay academics for peer review as a service.

jobsearch.bmj.com/jobs/job/Freel…

🚀We’re proud to present the #SIBRemarkableOutputs 2023!

The shortlist of achievements by SIB Members over the past year, including publications, software tools, databases & outreach projects.

👉Explore the latest innovative ideas in #bioinformatics : tinyurl.com/42hxs23s

I am incredibly proud of my two students ­김규리 / 학생 / 생물교육과 and Jaebeom Kim for receiving the prestigious Korean Presidential Scholarship '제1기 대학원 대통령과학장학금'. This is a very competitive price and it is exceptionally rare that two are awarded to the same lab. Congratulations

wow, that's insane!

🚀🚀🚀🚀🚀

About 12 hours ago, we introduced a bug in our web server, which resulted in Multimer results being visualized as Monomers. If you used it during this time frame, please try it again. It is fixed just now. I am sorry for the inconvience.

Another game-changing work from Martin Steinegger 🇺🇦 lab for the structural alignment of protein complexes. My lab had been struggling with this for years because no method was efficient enough to run PDB-wide searches.

Now, you can go all-vs-all 💪

So happy to have contributed!

Foldseek got published in 2024 in Volume 42 of Nature Biotechnology. Here is the timeline of FS releases:
Source code: 2021/07
Webserver: 2022/01
Preprint: 2022/02
Journal: 2023/05
Print: 2024/02

We just published a short paper on iMeta to introduce SeqKit's new functionality, performance optimizations, and improved user-friendliness, since the initial publication 7 years ago. onlinelibrary.wiley.com/doi/10.1002/im…

Have you ever wondered how your favorite protein structure compares against others? Maybe you designed a de novo fold? Maybe it looks like something unexpected?

Foldseek: Protein structure similarity search and alignment youtu.be/GASSu8hF0zs?fe… via YouTube

still haven't tried #AlphaFold for yourself? try #ColabFold from Sergey Ovchinnikov 🇺🇦 and Martin Steinegger 🇺🇦 groups! really fast hypothesis testing before needing to run AlphaFold yourself

Excited to share the final version of our genomic language model (gLM) paper out in Nature Communications! gLM learns hidden evolutionary patterns from metagenomes to expand functional inference beyond sequence and structure to include genomic context. nature.com/articles/s4146…

A reboot of the flagship Horizon Europe fund risks prioritizing a mindset geared towards security over open, future-facing research collaboration go.nature.com/3vDaKx4

.bioRxiv seems to be down here. Does anybody else experience similar issues?

Penguin is our new assembler that reconstructs manyfold more accurate strain-level viral genomes and 16S rRNAs from metagenomes through a novel greedy AA/DNA-hybrid bayesian overlap extension strategy. By Annika Jochheim et al.
📄biorxiv.org/content/10.110…
💾github.com/soedinglab/pla…